Nature Communications (Mar 2021)
Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research
- Colin Kern,
- Ying Wang,
- Xiaoqin Xu,
- Zhangyuan Pan,
- Michelle Halstead,
- Ganrea Chanthavixay,
- Perot Saelao,
- Susan Waters,
- Ruidong Xiang,
- Amanda Chamberlain,
- Ian Korf,
- Mary E. Delany,
- Hans H. Cheng,
- Juan F. Medrano,
- Alison L. Van Eenennaam,
- Chris K. Tuggle,
- Catherine Ernst,
- Paul Flicek,
- Gerald Quon,
- Pablo Ross,
- Huaijun Zhou
Affiliations
- Colin Kern
- Department of Animal Science, University of California, Davis
- Ying Wang
- Department of Animal Science, University of California, Davis
- Xiaoqin Xu
- Department of Animal Science, University of California, Davis
- Zhangyuan Pan
- Department of Animal Science, University of California, Davis
- Michelle Halstead
- Department of Animal Science, University of California, Davis
- Ganrea Chanthavixay
- Department of Animal Science, University of California, Davis
- Perot Saelao
- Department of Animal Science, University of California, Davis
- Susan Waters
- Department of Animal Science, University of California, Davis
- Ruidong Xiang
- Faculty of Veterinary and Agricultural Sciences, The University of Melbourne
- Amanda Chamberlain
- Agriculture Victoria, AgriBio, Centre for AgriBioscience
- Ian Korf
- Genome Center, University of California, Davis
- Mary E. Delany
- Department of Animal Science, University of California, Davis
- Hans H. Cheng
- USDA-ARS, Avian Disease and Oncology Laboratory
- Juan F. Medrano
- Department of Animal Science, University of California, Davis
- Alison L. Van Eenennaam
- Department of Animal Science, University of California, Davis
- Chris K. Tuggle
- Department of Animal Science, Iowa State University
- Catherine Ernst
- Department of Animal Science, Michigan State University
- Paul Flicek
- European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton
- Gerald Quon
- Department of Molecular and Cellular Biology, University of California, David
- Pablo Ross
- Department of Animal Science, University of California, Davis
- Huaijun Zhou
- Department of Animal Science, University of California, Davis
- DOI
- https://doi.org/10.1038/s41467-021-22100-8
- Journal volume & issue
-
Vol. 12,
no. 1
pp. 1 – 11
Abstract
In order to interpret non-coding variants, information about regulatory elements in the genome is essential. Here, the authors annotate regulatory elements in chicken, pig and cattle, and characterize conservation of these elements between species.
