Mitochondrial DNA. Part B. Resources (Dec 2017)
The complete mitochondrial genome of the horned lizard Phrynosoma blainvillii (Squamata: Phrynosomatidae) from California, USA
- Laura Ayala,
- Ga Hun Boo,
- Sung Min Boo,
- Brandon Cluff,
- Gage H. Dayton,
- Leah Edwards,
- Armando Garcia,
- Mariana Gomez,
- Thomas A. Jimenez,
- Jeffery R. Hughey,
- Timothy Huynh,
- Natalia I. Marquez,
- Ana I. Meza,
- Alexis D. Munoz,
- Cristina Perez,
- Dominic Pina,
- Michael Porras,
- Paola E. Razo,
- Alexis Rosales,
- Bailee Rusconi,
- Noel Salvador,
- Alicia Steinhardt,
- Ruben Tinajero,
- Nancy Wheat,
- Frances L. Wong,
- Ann Wright,
- Hartnell College Genomics Group
Affiliations
- Laura Ayala
- Hartnell College
- Ga Hun Boo
- University Herbarium, University of California
- Sung Min Boo
- Chungnam National University
- Brandon Cluff
- University of California
- Gage H. Dayton
- University of California Natural Reserves
- Leah Edwards
- Hartnell College
- Armando Garcia
- Hartnell College
- Mariana Gomez
- Hartnell College
- Thomas A. Jimenez
- Hartnell College
- Jeffery R. Hughey
- Hartnell College
- Timothy Huynh
- Hartnell College
- Natalia I. Marquez
- Hartnell College
- Ana I. Meza
- Hartnell College
- Alexis D. Munoz
- University of California
- Cristina Perez
- Hartnell College
- Dominic Pina
- Hartnell College
- Michael Porras
- Hartnell College
- Paola E. Razo
- Hartnell College
- Alexis Rosales
- Hartnell College
- Bailee Rusconi
- Hartnell College
- Noel Salvador
- Hartnell College
- Alicia Steinhardt
- Hartnell College
- Ruben Tinajero
- Hartnell College
- Nancy Wheat
- Hartnell College
- Frances L. Wong
- Hartnell College
- Ann Wright
- Hartnell College
- Hartnell College Genomics Group
- DOI
- https://doi.org/10.1080/23802359.2017.1407706
- Journal volume & issue
-
Vol. 2,
no. 2
pp. 851 – 852
Abstract
Analysis of Phrynosoma blainvillii Gray from Marina, Monterey County, California, using 150 bp paired-end Illumina sequences (Illumina, San Diego, CA) resulted in the assembly of its complete mitogenome. The mitogenome is 16,946 bp in length and contains a putative origin of light strand replication (OL), control region, 22 tRNA, 2 rRNA, and 13 protein-coding genes. Its content and organization are similar to other Squamata. Phylogenetic analysis of P. blainvillii resolves it in a clade with P. sherbrookei Nieto-Montes de Oca, Arenas-Moreno, Beltrán-Sánchez & Leaché, sister in position to Uma notata Baird. Mitochondrial marker analysis of P. blainvillii from Marina shows that it belongs to a coastal Santa Lucia Mountain Range haplogroup that is distinct from other populations of P. blainvillii in California.
Keywords
