Non-Invasive Single-Grain Screening of Proteins and Other Features by Combination of Near-Infrared Spectroscopy and Nuclear Magnetic Resonance

Abstract

The non-invasive analysis of seeds is of great interest to experimental biologists and breeders. To reach a high varietal identity and purity of seed material, it is often necessary to access features of individual seeds via the screening of mutant populations. While near-infrared spectroscopy (NIRS) and time-domain nuclear-magnetic-resonance spectroscopy (TD-NMR) are well-known in seed research and industry for bulk seed measurements, their application for individual seeds is challenging. Here we demonstrate how to overcome this limitation using a practical approach to cereal grains using oat (Avena sp.) as a model. For this, we generated a representative collection of oat seeds from the ex situ German federal gene bank, which includes wide variation in grain size, shape, and coloration. Next, we established a short experimental pipeline to exemplify how to improve the procedure for individual seed measurements. In its current state, the method is ready to use for the high-accuracy estimation of nitrogen (protein) content (R2 = 0.877), water content (R2 = 0.715), and seed weight (R2 = 0.897) of individual oat grains. This work introduces the combination of NIRS and TD-NMR as an efficient, precise, and, most importantly, non-destructive analytic platform for a high throughput analysis of individual intact seeds.

Keywords

• single seed analysis
• protein
• magnetic resonance imaging
• near-infrared spectroscopy
• time-domain nuclear magnetic resonance spectroscopy