Nature Communications (Feb 2022)

A robust method for collider bias correction in conditional genome-wide association studies

  • Osama Mahmoud,
  • Frank Dudbridge,
  • George Davey Smith,
  • Marcus Munafo,
  • Kate Tilling

DOI
https://doi.org/10.1038/s41467-022-28119-9
Journal volume & issue
Vol. 13, no. 1
pp. 1 – 13

Abstract

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Genetic associations can be biased by conditioning on a phenotype. This study presents ‘Slope-Hunter’, a method which uses model-based clustering to correct this bias, even in the presence of genetic correlation, assuming the class of SNPs affecting only the collider explains more variation in the collider than any other class of SNPs.