Nature Communications (Aug 2016)

Prediction and validation of protein intermediate states from structurally rich ensembles and coarse-grained simulations

  • Laura Orellana,
  • Ozge Yoluk,
  • Oliver Carrillo,
  • Modesto Orozco,
  • Erik Lindahl

DOI
https://doi.org/10.1038/ncomms12575
Journal volume & issue
Vol. 7, no. 1
pp. 1 – 14

Abstract

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Protein conformational changes are key to a wide range of cellular functions but remain difficult to access experimentally. Here the authors describe eBDIMS, a novel approach to predict intermediates observed in structural transition pathways from experimental ensembles.