Biodiversity Data Journal (Nov 2023)
Envisaging a global infrastructure to exploit the potential of digitised collections
- Quentin Groom,
- Mathias Dillen,
- Wouter Addink,
- Arturo H. Ariño,
- Christian Bölling,
- Pierre Bonnet,
- Lorenzo Cecchi,
- Elizabeth R. Ellwood,
- Rui Figueira,
- Pierre-Yves Gagnier,
- Olwen Grace,
- Anton Güntsch,
- Helen Hardy,
- Pieter Huybrechts,
- Roger Hyam,
- Alexis Joly,
- Vamsi Krishna Kommineni,
- Isabel Larridon,
- Laurence Livermore,
- Ricardo Jorge Lopes,
- Sofie Meeus,
- Jeremy Miller,
- Kenzo Milleville,
- Renato Panda,
- Marc Pignal,
- Jorrit Poelen,
- Blagoj Ristevski,
- Tim Robertson,
- Ana Rufino,
- Joaquim Santos,
- Maarten Schermer,
- Ben Scott,
- Katja Seltmann,
- Heliana Teixeira,
- Maarten Trekels,
- Jitendra Gaikwad
Affiliations
- Quentin Groom
- Meise Botanic Garden
- Mathias Dillen
- Meise Botanic Garden
- Wouter Addink
- Distributed System of Scientific Collections - DiSSCo
- Arturo H. Ariño
- University of Navarra
- Christian Bölling
- Museum für Naturkunde Berlin
- Pierre Bonnet
- UMR AMAP, CIRAD
- Lorenzo Cecchi
- Sezione di Botanica Filippo Parlatore, Museo di Storia Naturale, Università di Firenze, Via G. La Pira 4
- Elizabeth R. Ellwood
- iDigBio
- Rui Figueira
- CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Instituto Superior de Agronomia, Universidade de Lisboa, Tapada da Ajuda
- Pierre-Yves Gagnier
- Muséum national d'histoire naturelle
- Olwen Grace
- Royal Botanic Garden Edinburgh
- Anton Güntsch
- Freie Universität Berlin, Botanic Garden and Botanical Museum Berlin
- Helen Hardy
- Natural History Museum
- Pieter Huybrechts
- Research Institute for Nature and Forest (INBO)
- Roger Hyam
- Royal Botanic Garden Edinburgh
- Alexis Joly
- INRIA
- Vamsi Krishna Kommineni
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig
- Isabel Larridon
- Ghent University
- Laurence Livermore
- The Natural History Museum
- Ricardo Jorge Lopes
- MHNC-UP, Natural History and Science Museum of the University of Porto
- Sofie Meeus
- Meise Botanic Garden
- Jeremy Miller
- Plazi
- Kenzo Milleville
- Ghent University
- Renato Panda
- Centre for Informatics and Systems of the University of Coimbra (CISUC)
- Marc Pignal
- MNHN
- Jorrit Poelen
- Ronin Institute
- Blagoj Ristevski
- Faculty of Information and Communication Technologies- Bitola, University “St. Kliment Ohridski”
- Tim Robertson
- Global Biodiversity Information Facility
- Ana Rufino
- Museu da Ciência da Universidade de Coimbra
- Joaquim Santos
- Centre for Functional Ecology, Department of Life Sciences, University of Coimbra
- Maarten Schermer
- Utrecht University
- Ben Scott
- Natural History Museum
- Katja Seltmann
- Cheadle Center for Biodiversity and Ecological Restoration, University of California Santa Barbara
- Heliana Teixeira
- CESAM & Department of Biology, University of Aveiro
- Maarten Trekels
- Meise Botanic Garden
- Jitendra Gaikwad
- Friedrich Schiller University Jena
- DOI
- https://doi.org/10.3897/BDJ.11.e109439
- Journal volume & issue
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Vol. 11
pp. 1 – 29
Abstract
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Tens of millions of images from biological collections have become available online over the last two decades. In parallel, there has been a dramatic increase in the capabilities of image analysis technologies, especially those involving machine learning and computer vision. While image analysis has become mainstream in consumer applications, it is still used only on an artisanal basis in the biological collections community, largely because the image corpora are dispersed. Yet, there is massive untapped potential for novel applications and research if images of collection objects could be made accessible in a single corpus. In this paper, we make the case for infrastructure that could support image analysis of collection objects. We show that such infrastructure is entirely feasible and well worth investing in.
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