GENOTYPING OF ISOLATED VIRUSES FROM RAINBOW TROUT (ONCORHYNCHUS MYKISS) IN CROATIA

Abstract

Infectious hematopoietic necrosis virus (IHNV) and infectious pancreatic necrosis virus (IPNV) are important pathogens in rainbow trout aquaculture. Detection of these viruses in Croatia initiated investigation of their genetic relatedness to the worldwide IHNV and IPNV isolates. For this purpose, determination of nucleotide sequences of G and NV genes for IHNV and VP2/NS region for IPNV was performed. Phylogenetic analyses revealed that Croatian IHNV isolate was clustering within European clade most closely related to the North American M genogroup. Croatian IPNV isolate appeared in the cluster of genogroup III, together with French, English, Danish and Norwegian isolates. These results are important for further epidemiological studies of IHNV and IPNV outbreaks in Croatia.

Keywords

• infectious hematopoietic necrosis virus
• infectious pancreatic necrosis virus
• genotype
• phylogenetic relatedness