Nature Communications (Nov 2019)

In-cell identification and measurement of RNA-protein interactions

  • Antoine Graindorge,
  • Inês Pinheiro,
  • Anna Nawrocka,
  • Allison C. Mallory,
  • Peter Tsvetkov,
  • Noa Gil,
  • Carlo Carolis,
  • Frank Buchholz,
  • Igor Ulitsky,
  • Edith Heard,
  • Mikko Taipale,
  • Alena Shkumatava

DOI
https://doi.org/10.1038/s41467-019-13235-w
Journal volume & issue
Vol. 10, no. 1
pp. 1 – 11

Abstract

Read online

RNA-interacting proteome can be identified by RNA affinity purification followed by mass spectrometry. Here the authors developed a different RNA-centric technology that combines high-throughput immunoprecipitation of RNA binding proteins and luciferase-based detection of their interaction with the RNA.