Nature Communications (Sep 2016)
Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum
- Martina Peter,
- Annegret Kohler,
- Robin A. Ohm,
- Alan Kuo,
- Jennifer Krützmann,
- Emmanuelle Morin,
- Matthias Arend,
- Kerrie W. Barry,
- Manfred Binder,
- Cindy Choi,
- Alicia Clum,
- Alex Copeland,
- Nadine Grisel,
- Sajeet Haridas,
- Tabea Kipfer,
- Kurt LaButti,
- Erika Lindquist,
- Anna Lipzen,
- Renaud Maire,
- Barbara Meier,
- Sirma Mihaltcheva,
- Virginie Molinier,
- Claude Murat,
- Stefanie Pöggeler,
- C. Alisha Quandt,
- Christoph Sperisen,
- Andrew Tritt,
- Emilie Tisserant,
- Pedro W. Crous,
- Bernard Henrissat,
- Uwe Nehls,
- Simon Egli,
- Joseph W. Spatafora,
- Igor V. Grigoriev,
- Francis M. Martin
Affiliations
- Martina Peter
- Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111
- Annegret Kohler
- INRA, UMR INRA-Université de Lorraine ‘Interactions Arbres/Microorganismes’, Laboratoire d’Excellence ARBRE, INRA-Nancy
- Robin A. Ohm
- US Department of Energy Joint Genome Institute (JGI)
- Alan Kuo
- US Department of Energy Joint Genome Institute (JGI)
- Jennifer Krützmann
- University of Bremen, Botany, Leobenerstr. 2
- Emmanuelle Morin
- INRA, UMR INRA-Université de Lorraine ‘Interactions Arbres/Microorganismes’, Laboratoire d’Excellence ARBRE, INRA-Nancy
- Matthias Arend
- Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111
- Kerrie W. Barry
- US Department of Energy Joint Genome Institute (JGI)
- Manfred Binder
- CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8
- Cindy Choi
- US Department of Energy Joint Genome Institute (JGI)
- Alicia Clum
- US Department of Energy Joint Genome Institute (JGI)
- Alex Copeland
- US Department of Energy Joint Genome Institute (JGI)
- Nadine Grisel
- Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111
- Sajeet Haridas
- US Department of Energy Joint Genome Institute (JGI)
- Tabea Kipfer
- Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111
- Kurt LaButti
- US Department of Energy Joint Genome Institute (JGI)
- Erika Lindquist
- US Department of Energy Joint Genome Institute (JGI)
- Anna Lipzen
- US Department of Energy Joint Genome Institute (JGI)
- Renaud Maire
- Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111
- Barbara Meier
- Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111
- Sirma Mihaltcheva
- US Department of Energy Joint Genome Institute (JGI)
- Virginie Molinier
- Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111
- Claude Murat
- INRA, UMR INRA-Université de Lorraine ‘Interactions Arbres/Microorganismes’, Laboratoire d’Excellence ARBRE, INRA-Nancy
- Stefanie Pöggeler
- Department of Genetics of Eukaryotic Microorganisms, Institute of Microbiology and Genetics, Georg-August-University Göttingen
- C. Alisha Quandt
- Department of Ecology and Evolutionary Biology, University of Michigan
- Christoph Sperisen
- Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111
- Andrew Tritt
- US Department of Energy Joint Genome Institute (JGI)
- Emilie Tisserant
- INRA, UMR INRA-Université de Lorraine ‘Interactions Arbres/Microorganismes’, Laboratoire d’Excellence ARBRE, INRA-Nancy
- Pedro W. Crous
- CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8
- Bernard Henrissat
- Centre National de la Recherche Scientifique, UMR 7257
- Uwe Nehls
- University of Bremen, Botany, Leobenerstr. 2
- Simon Egli
- Swiss Federal Research Institute WSL, Forest Dynamics, Zuercherstrasse 111
- Joseph W. Spatafora
- Department of Botany and Plant Pathology, Oregon State University
- Igor V. Grigoriev
- US Department of Energy Joint Genome Institute (JGI)
- Francis M. Martin
- INRA, UMR INRA-Université de Lorraine ‘Interactions Arbres/Microorganismes’, Laboratoire d’Excellence ARBRE, INRA-Nancy
- DOI
- https://doi.org/10.1038/ncomms12662
- Journal volume & issue
-
Vol. 7,
no. 1
pp. 1 – 15
Abstract
The ascomycete Cenococcum geophilum is a beneficial mycorrhizal symbiont found frequently on tree roots. Here the authors use comparative genomics and transcriptomics to define genomic signatures that differentiate the beneficial C. geophilumfrom its saprotrophic and pathogenic relatives.
