Nature Communications (Jul 2019)

Nuclei multiplexing with barcoded antibodies for single-nucleus genomics

  • Jellert T. Gaublomme,
  • Bo Li,
  • Cristin McCabe,
  • Abigail Knecht,
  • Yiming Yang,
  • Eugene Drokhlyansky,
  • Nicholas Van Wittenberghe,
  • Julia Waldman,
  • Danielle Dionne,
  • Lan Nguyen,
  • Philip L. De Jager,
  • Bertrand Yeung,
  • Xinfang Zhao,
  • Naomi Habib,
  • Orit Rozenblatt-Rosen,
  • Aviv Regev

DOI
https://doi.org/10.1038/s41467-019-10756-2
Journal volume & issue
Vol. 10, no. 1
pp. 1 – 8

Abstract

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Single-nucleus RNA-seq enables interrogation of complex tissues but is limited due to batch effects and processing costs. Here the authors use barcoded antibodies against the nuclear pore complex to label nuclei from distinct samples, and develop a computational tool to assign the sample of origin.