Frontiers in Microbiology (Jul 2022)

Non-structure protein ORF1ab (NSP8) in SARS-CoV-2 contains potential γδT cell epitopes

  • Boyu Du,
  • Boyu Du,
  • Boyu Du,
  • Yang Guo,
  • Yang Guo,
  • Gang Li,
  • Yunhe Zhu,
  • Yunfu Wang,
  • Xueyan Xi,
  • Xueyan Xi,
  • Xueyan Xi

DOI
https://doi.org/10.3389/fmicb.2022.936272
Journal volume & issue
Vol. 13

Abstract

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Upon activation by the pathogen through T-cell receptors (TCRs), γδT cells suppress the pathogenic replication and thus play important roles against viral infections. Targeting SARS-CoV-2 via γδT cells provides alternative therapeutic strategies. However, little is known about the recognition of SARS-CoV-2 antigens by γδT cells. We discovered a specific Vγ9/δ2 CDR3 by analyzing γδT cells derived from the patients infected by SARS-CoV-2. Using a cell model exogenously expressing γδ-TCR established, we further screened the structural motifs within the CDR3 responsible for binding to γδ-TCR. Importantly, these sequences were mapped to NSP8, a non-structural protein in SARS-CoV-2. Our results suggest that NSP8 mediates the recognition by γδT cells and thus could serve as a potential target for vaccines.

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