Computational and Structural Biotechnology Journal (Jan 2022)

The seen and the unseen: Molecular classification and image based-analysis of gastrointestinal cancers

  • Corina-Elena Minciuna,
  • Mihai Tanase,
  • Teodora Ecaterina Manuc,
  • Stefan Tudor,
  • Vlad Herlea,
  • Mihnea P. Dragomir,
  • George A. Calin,
  • Catalin Vasilescu

Journal volume & issue
Vol. 20
pp. 5065 – 5075

Abstract

Read online

Gastrointestinal cancers account for 22.5% of cancer related deaths worldwide and represent circa 20% of all cancers. In the last decades, we have witnessed a shift from histology-based to molecular-based classifications using genomic, epigenomic, and transcriptomic data. The molecular based classification revealed new prognostic markers and may aid the therapy selection. Because of the high-costs to perform a molecular classification, in recent years immunohistochemistry-based surrogate classification were developed which permit the stratification of patients, and in parallel multiple groups developed hematoxylin and eosin whole slide image analysis for sub-classifying these entities. Hence, we are witnessing a return to an image-based classification with the purpose to infer hidden information from routine histology images that would permit to detect the patients that respond to specific therapies and would be able to predict their outcome. In this review paper, we will discuss the current histological, molecular, and immunohistochemical classifications of the most common gastrointestinal cancers, gastric adenocarcinoma, and colorectal adenocarcinoma, and will present key aspects for developing a new artificial intelligence aided image-based classification of these malignancies.

Keywords