Nature Communications (Apr 2021)

Optimized photochemistry enables efficient analysis of dynamic RNA structuromes and interactomes in genetic and infectious diseases

  • Minjie Zhang,
  • Kongpan Li,
  • Jianhui Bai,
  • Willem A. Velema,
  • Chengqing Yu,
  • Ryan van Damme,
  • Wilson H. Lee,
  • Maia L. Corpuz,
  • Jian-Fu Chen,
  • Zhipeng Lu

DOI
https://doi.org/10.1038/s41467-021-22552-y
Journal volume & issue
Vol. 12, no. 1
pp. 1 – 14

Abstract

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RNA crosslinking and proximity ligation methods are used to identify transcriptome-wide base pairing interactions. Here, the authors report PARIS2 (psoralen analysis of RNA interactions and structures 2), a method for RNA duplex determination in vivo with higher efficiency than the previous PARIS method.