Nature Communications (Apr 2023)

Trim-Away ubiquitinates and degrades lysine-less and N-terminally acetylated substrates

  • Leo Kiss,
  • Tyler Rhinesmith,
  • Jakub Luptak,
  • Claire F. Dickson,
  • Jonas Weidenhausen,
  • Shannon Smyly,
  • Ji-Chun Yang,
  • Sarah L. Maslen,
  • Irmgard Sinning,
  • David Neuhaus,
  • Dean Clift,
  • Leo C. James

DOI
https://doi.org/10.1038/s41467-023-37504-x
Journal volume & issue
Vol. 14, no. 1
pp. 1 – 17

Abstract

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Abstract TRIM proteins are the largest family of E3 ligases in mammals. They include the intracellular antibody receptor TRIM21, which is responsible for mediating targeted protein degradation during Trim-Away. Despite their importance, the ubiquitination mechanism of TRIM ligases has remained elusive. Here we show that while Trim-Away activation results in ubiquitination of both ligase and substrate, ligase ubiquitination is not required for substrate degradation. N-terminal TRIM21 RING ubiquitination by the E2 Ube2W can be inhibited by N-terminal acetylation, but this doesn’t prevent substrate ubiquitination nor degradation. Instead, uncoupling ligase and substrate degradation prevents ligase recycling and extends functional persistence in cells. Further, Trim-Away degrades substrates irrespective of whether they contain lysines or are N-terminally acetylated, which may explain the ability of TRIM21 to counteract fast-evolving pathogens and degrade diverse substrates.