IUCrJ (Jan 2019)

A jumping crystal predicted with molecular dynamics and analysed with TLS refinement against powder diffraction data

  • Jacco van de Streek,
  • Edith Alig,
  • Simon Parsons,
  • Liana Vella-Zarb

DOI
https://doi.org/10.1107/S205225251801686X
Journal volume & issue
Vol. 6, no. 1
pp. 136 – 144

Abstract

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By running a temperature series of molecular dynamics (MD) simulations starting from the known low-temperature phase, the experimentally observed phase transition in a `jumping crystal' was captured, thereby providing a prediction of the unknown crystal structure of the high-temperature phase and clarifying the phase-transition mechanism. The phase transition is accompanied by a discontinuity in two of the unit-cell parameters. The structure of the high-temperature phase is very similar to that of the low-temperature phase. The anisotropic displacement parameters calculated from the MD simulations readily identified libration as the driving force behind the phase transition. Both the predicted crystal structure and the phase-transition mechanism were verified experimentally using TLS (translation, libration, screw) refinement against X-ray powder diffraction data.

Keywords