Nature Communications (Nov 2022)

UniTVelo: temporally unified RNA velocity reinforces single-cell trajectory inference

  • Mingze Gao,
  • Chen Qiao,
  • Yuanhua Huang

DOI
https://doi.org/10.1038/s41467-022-34188-7
Journal volume & issue
Vol. 13, no. 1
pp. 1 – 11

Abstract

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RNA velocity can detect the differentiation directionality by modelling sparse unspliced RNAs, but suffers from high estimation errors. Here, the authors develop a computational method called UniTVelo to reinforce the velocity estimation by introducing a unified time and a top-down model design.