PLoS ONE (Jan 2013)

Genetic associations with diabetes: meta-analyses of 10 candidate polymorphisms.

  • Linlin Tang,
  • Lingyan Wang,
  • Qi Liao,
  • Qinwen Wang,
  • Leiting Xu,
  • Shizhong Bu,
  • Yi Huang,
  • Cheng Zhang,
  • Huadan Ye,
  • Xuting Xu,
  • Qiong Liu,
  • Meng Ye,
  • Yifeng Mai,
  • Shiwei Duan

DOI
https://doi.org/10.1371/journal.pone.0070301
Journal volume & issue
Vol. 8, no. 7
p. e70301

Abstract

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AIMS: The goal of our study is to investigate the combined contribution of 10 genetic variants to diabetes susceptibility. METHODS: Bibliographic databases were searched from 1970 to Dec 2012 for studies that reported on genetic association study of diabetes. After a comprehensive filtering procedure, 10 candidate gene variants with informative genotype information were collected for the current meta-anlayses. Using the REVMAN software, odds ratios (ORs) with 95% confidence intervals (CIs) were calculated to evaluate the combined contribution of the selected genetic variants to diabetes. RESULTS: A total of 37 articles among 37,033 cases and 54,716 controls were involved in the present meta-analyses of 10 genetic variants. Three variants were found to be significantly associated with type 1 diabetes (T1D): NLRP1 rs12150220 (OR = 0.71, 95% CI = 0.55-0.92, P = 0.01), IL2RA rs11594656 (OR = 0.86, 95% CI = 0.82-0.91, P<0.00001), and CLEC16A rs725613 (OR = 0.71, 95% CI = 0.55-0.92, P = 0.01). APOA5 -1131T/C polymorphism was shown to be significantly associated with of type 2 diabetes (T2D, OR = 1.27, 95% CI = 1.03-1.57, P = 0.03). No association with diabetes was showed in the meta-analyses of other six genetic variants, including SLC2A10 rs2335491, ATF6 rs2070150, KLF11 rs35927125, CASQ1 rs2275703, GNB3 C825T, and IL12B 1188A/C. CONCLUSION: Our results demonstrated that IL2RA rs11594656 and CLEC16A rs725613 are protective factors of T1D, while NLRP1 rs12150220 and APOA5 -1131T/C are risky factors of T1D and T2D, respectively.