Bioinfomatics for the Citrus EST Project (CitEST)

Abstract

In this work we describe all the computational environments, pipelines, and web services developed for the CitEST transcriptome project, on which all the annotation researchers relied. We also present a complete list of CitEST libraries and, for each of them, the general features after the in silico processing, showing some quantitative information.

Keywords

• transcriptomics
• comparative genomics
• clustering
• trimming
• digital northern