Nature Communications (Nov 2017)

Inference of differentiation time for single cell transcriptomes using cell population reference data

  • Na Sun,
  • Xiaoming Yu,
  • Fang Li,
  • Denghui Liu,
  • Shengbao Suo,
  • Weiyang Chen,
  • Shirui Chen,
  • Lu Song,
  • Christopher D. Green,
  • Joseph McDermott,
  • Qin Shen,
  • Naihe Jing,
  • Jing-Dong J. Han

DOI
https://doi.org/10.1038/s41467-017-01860-2
Journal volume & issue
Vol. 8, no. 1
pp. 1 – 12

Abstract

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Single cell transcriptome data can be used to determine developmental lineage trajectories. Here the authors map single cell transcriptomes onto a differentiation trajectory defined by cell population transcriptomes and show that cell cycle regulators have a role in differentiation timing.