Nature Communications (Sep 2018)

microCLIP super learning framework uncovers functional transcriptome-wide miRNA interactions

  • Maria D. Paraskevopoulou,
  • Dimitra Karagkouni,
  • Ioannis S. Vlachos,
  • Spyros Tastsoglou,
  • Artemis G. Hatzigeorgiou

DOI
https://doi.org/10.1038/s41467-018-06046-y
Journal volume & issue
Vol. 9, no. 1
pp. 1 – 16

Abstract

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AGO-PAR-CLIP is widely used for high-throughput miRNA target characterization. Here, the authors show that the previously neglected non-T-to-C clusters denote functional miRNA binding events, and develop microCLIP, a super learning framework that accurately detects miRNA interactions.