Variability of Genomic Profile of ypr-10 Gene in <i>Citrus sinensis</i> L. Osbeck

Abstract

Citrus fruits enjoy widespread consumption globally, being among the most popular fruits. They are highly regarded for their nutritional composition, offering a range of beneficial nutrients. However, it is important to acknowledge that they can also elicit allergic reactions in sensitized individuals, which presents a contrasting aspect. The Bet v 1 cross-reacting allergen is a major birch pollen allergen, and it is the most commonly sensitizing allergen in central Europe. Bet v 1 belongs to the group of PR-10 proteins in the plant kingdom that cause various allergic reactions. The Bet v 1 allergen has a number of isoforms and homologs. These homolog genes are inherited from a common ancestor and subsequent amino acid similarity. They can cause the phenomenon of cross-reactivity in food allergies. The aim of the study was to analyze the length of polymorphism variability of the Bet v 1 homolog in orange varieties by using degenerated and nondegenerated primers. A total of eight varieties of Citrus sinensis L. Osbeck were used in the analysis. The BBAP technique (Bet v 1 based amplified polymorphism) was used to detect the length variability of fingerprints of allergen encoding genes of Bet v 1 homologs. Degenerated primer combinations and only one of the nondegenerated variants of primers provided fingerprints that were unique for every individual variety of analyzed oranges. By using other primer variants, from two up to the four varieties generated by the same BBAP profile, indicate a higher degree of Bet v 1 homolog sequential conservativity when compared to other fruit species.

Keywords

• <i>Citrus sinensis</i> L. Osbeck
• Bet v 1
• BBAP
• polymorphism