BioMedInformatics (Mar 2024)

Overall Survival Time Estimation for Epithelioid Peritoneal Mesothelioma Patients from Whole-Slide Images

  • Kleanthis Marios Papadopoulos,
  • Panagiotis Barmpoutis,
  • Tania Stathaki,
  • Vahan Kepenekian,
  • Peggy Dartigues,
  • Séverine Valmary-Degano,
  • Claire Illac-Vauquelin,
  • Gerlinde Avérous,
  • Anne Chevallier,
  • Marie-Hélène Laverriere,
  • Laurent Villeneuve,
  • Olivier Glehen,
  • Sylvie Isaac,
  • Juliette Hommell-Fontaine,
  • Francois Ng Kee Kwong,
  • Nazim Benzerdjeb

DOI
https://doi.org/10.3390/biomedinformatics4010046
Journal volume & issue
Vol. 4, no. 1
pp. 823 – 836

Abstract

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Background: The advent of Deep Learning initiated a new era in which neural networks relying solely on Whole-Slide Images can estimate the survival time of cancer patients. Remarkably, despite deep learning’s potential in this domain, no prior research has been conducted on image-based survival analysis specifically for peritoneal mesothelioma. Prior studies performed statistical analysis to identify disease factors impacting patients’ survival time. Methods: Therefore, we introduce MPeMSupervisedSurv, a Convolutional Neural Network designed to predict the survival time of patients diagnosed with this disease. We subsequently perform patient stratification based on factors such as their Peritoneal Cancer Index and on whether patients received chemotherapy treatment. Results: MPeMSupervisedSurv demonstrates improvements over comparable methods. Using our proposed model, we performed patient stratification to assess the impact of clinical variables on survival time. Notably, the inclusion of information regarding adjuvant chemotherapy significantly enhances the model’s predictive prowess. Conversely, repeating the process for other factors did not yield significant performance improvements. Conclusions: Overall, MPeMSupervisedSurv is an effective neural network which can predict the survival time of peritoneal mesothelioma patients. Our findings also indicate that treatment by adjuvant chemotherapy could be a factor affecting survival time.

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