Computational refinement of spectroscopic FRET measurements

Alexander Kyrychenko; Mykola V. Rodnin; Chiranjib Ghatak; Alexey S. Ladokhin

doi:10.1016/j.dib.2017.03.041

Data in Brief (Jun 2017)

Computational refinement of spectroscopic FRET measurements

Alexander Kyrychenko,
Mykola V. Rodnin,
Chiranjib Ghatak,
Alexey S. Ladokhin

Affiliations

Alexander Kyrychenko: Institute of Chemistry and School of Chemistry, V. N. Karazin Kharkiv National University, 4 Svobody Square, Kharkiv 61022, Ukraine
Mykola V. Rodnin: Department of Biochemistry and Molecular Biology, The University of Kansas Medical Center Kansas City, KS66160-7421, USA
Chiranjib Ghatak: Department of Biochemistry and Molecular Biology, The University of Kansas Medical Center Kansas City, KS66160-7421, USA
Alexey S. Ladokhin: Department of Biochemistry and Molecular Biology, The University of Kansas Medical Center Kansas City, KS66160-7421, USA

DOI: https://doi.org/10.1016/j.dib.2017.03.041
Journal volume & issue: Vol. 12, no. C
pp. 213 – 221

Abstract

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This article supplies raw data related to a research article entitled “Joint refinement of FRET measurements using spectroscopic and computational tools” (Kyrychenko et al., 2017) [1], in which we demonstrate the use of molecular dynamics simulations to estimate FRET orientational factors in a benchmark donor-linker-acceptor system of enhanced cyan (ECFP) and enhanced yellow (EYFP) fluorescent proteins. This can improve the recalculation of donor-acceptor distance information from single-molecule FRET measurements.

Published in Data in Brief

ISSN: 2352-3409 (Online)
Publisher: Elsevier
Country of publisher: United States
LCC subjects: Medicine: Medicine (General): Computer applications to medicine. Medical informatics; Science: Science (General)
Website: http://www.journals.elsevier.com/data-in-brief/

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Abstract

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