The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family

Mary Galli; Arjun Khakhar; Zefu Lu; Zongliang Chen; Sidharth Sen; Trupti Joshi; Jennifer L. Nemhauser; Robert J. Schmitz; Andrea Gallavotti

doi:10.1038/s41467-018-06977-6

Nature Communications (Oct 2018)

The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family

Mary Galli,
Arjun Khakhar,
Zefu Lu,
Zongliang Chen,
Sidharth Sen,
Trupti Joshi,
Jennifer L. Nemhauser,
Robert J. Schmitz,
Andrea Gallavotti

Affiliations

Mary Galli: Waksman Institute of Microbiology, Rutgers University
Arjun Khakhar: Department of Biology, University of Washington
Zefu Lu: Department of Genetics, The University of Georgia
Zongliang Chen: Waksman Institute of Microbiology, Rutgers University
Sidharth Sen: Informatics Institute, University of Missouri
Trupti Joshi: Informatics Institute, University of Missouri
Jennifer L. Nemhauser: Department of Biology, University of Washington
Robert J. Schmitz: Department of Genetics, The University of Georgia
Andrea Gallavotti: Waksman Institute of Microbiology, Rutgers University

DOI: https://doi.org/10.1038/s41467-018-06977-6
Journal volume & issue: Vol. 9, no. 1
pp. 1 – 14

Abstract

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AUXIN RESPONSE FACTORS (ARFs) are a family of plant-specific transcriptional factors involved in auxin signaling. Here, the authors adapt DAP-seq technology to show the binding landscape of 14 maize ARFs and reveal class-specific binding properties and transcriptional coordination by ARFs from different classes.

Published in Nature Communications

ISSN: 2041-1723 (Online)
Publisher: Nature Portfolio
Country of publisher: United Kingdom
LCC subjects: Science
Website: https://www.nature.com/ncomms/

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