Nature Communications (Jun 2022)

ChIP-Hub provides an integrative platform for exploring plant regulome

  • Liang-Yu Fu,
  • Tao Zhu,
  • Xinkai Zhou,
  • Ranran Yu,
  • Zhaohui He,
  • Peijing Zhang,
  • Zhigui Wu,
  • Ming Chen,
  • Kerstin Kaufmann,
  • Dijun Chen

DOI
https://doi.org/10.1038/s41467-022-30770-1
Journal volume & issue
Vol. 13, no. 1
pp. 1 – 15

Abstract

Read online

A comprehensive data portal to explore plant regulomes is still unavailable. Here, the authors develop a web-based platform ChIP-Hub in the ENCODE standards and demonstrate its applications in the identification of hierarchical regulatory network, tissue-specific chromatin dynamics, putative enhancers and chromatin states.