Clinical and Translational Medicine (Jun 2022)
EASY‐APP: An artificial intelligence model and application for early and easy prediction of severity in acute pancreatitis
- Balázs Kui,
- József Pintér,
- Roland Molontay,
- Marcell Nagy,
- Nelli Farkas,
- Noémi Gede,
- Áron Vincze,
- Judit Bajor,
- Szilárd Gódi,
- József Czimmer,
- Imre Szabó,
- Anita Illés,
- Patrícia Sarlós,
- Roland Hágendorn,
- Gabriella Pár,
- Mária Papp,
- Zsuzsanna Vitális,
- György Kovács,
- Eszter Fehér,
- Ildikó Földi,
- Ferenc Izbéki,
- László Gajdán,
- Roland Fejes,
- Balázs Csaba Németh,
- Imola Török,
- Hunor Farkas,
- Artautas Mickevicius,
- Ville Sallinen,
- Shamil Galeev,
- Elena Ramírez‐Maldonado,
- Andrea Párniczky,
- Bálint Erőss,
- Péter Jenő Hegyi,
- Katalin Márta,
- Szilárd Váncsa,
- Robert Sutton,
- Peter Szatmary,
- Diane Latawiec,
- Chris Halloran,
- Enrique de‐Madaria,
- Elizabeth Pando,
- Piero Alberti,
- Maria José Gómez‐Jurado,
- Alina Tantau,
- Andrea Szentesi,
- Péter Hegyi,
- the Hungarian Pancreatic Study Group
Affiliations
- Balázs Kui
- Department of Medicine University of Szeged Szeged Hungary
- József Pintér
- Department of Stochastics, Institute of Mathematics Budapest University of Technology and Economics Budapest Hungary
- Roland Molontay
- Department of Stochastics, Institute of Mathematics Budapest University of Technology and Economics Budapest Hungary
- Marcell Nagy
- Department of Stochastics, Institute of Mathematics Budapest University of Technology and Economics Budapest Hungary
- Nelli Farkas
- Institute for Translational Medicine, Szentágothai Research Centre, Medical School University of Pécs Pécs Hungary
- Noémi Gede
- Institute for Translational Medicine, Szentágothai Research Centre, Medical School University of Pécs Pécs Hungary
- Áron Vincze
- Division of Gastroenterology, First Department of Medicine University of Pécs, Medical School Pécs Hungary
- Judit Bajor
- Division of Gastroenterology, First Department of Medicine University of Pécs, Medical School Pécs Hungary
- Szilárd Gódi
- Division of Gastroenterology, First Department of Medicine University of Pécs, Medical School Pécs Hungary
- József Czimmer
- Division of Gastroenterology, First Department of Medicine University of Pécs, Medical School Pécs Hungary
- Imre Szabó
- Division of Gastroenterology, First Department of Medicine University of Pécs, Medical School Pécs Hungary
- Anita Illés
- Division of Gastroenterology, First Department of Medicine University of Pécs, Medical School Pécs Hungary
- Patrícia Sarlós
- Division of Gastroenterology, First Department of Medicine University of Pécs, Medical School Pécs Hungary
- Roland Hágendorn
- Division of Gastroenterology, First Department of Medicine University of Pécs, Medical School Pécs Hungary
- Gabriella Pár
- Division of Gastroenterology, First Department of Medicine University of Pécs, Medical School Pécs Hungary
- Mária Papp
- Department of Gastroenterology, Institute of Internal Medicine, Faculty of Medicine University of Debrecen Debrecen Hungary
- Zsuzsanna Vitális
- Department of Gastroenterology, Institute of Internal Medicine, Faculty of Medicine University of Debrecen Debrecen Hungary
- György Kovács
- Department of Gastroenterology, Institute of Internal Medicine, Faculty of Medicine University of Debrecen Debrecen Hungary
- Eszter Fehér
- Department of Gastroenterology, Institute of Internal Medicine, Faculty of Medicine University of Debrecen Debrecen Hungary
- Ildikó Földi
- Department of Gastroenterology, Institute of Internal Medicine, Faculty of Medicine University of Debrecen Debrecen Hungary
- Ferenc Izbéki
- Szent György Teaching Hospital of County Fejér Székesfehérvár Hungary
- László Gajdán
- Szent György Teaching Hospital of County Fejér Székesfehérvár Hungary
- Roland Fejes
- Szent György Teaching Hospital of County Fejér Székesfehérvár Hungary
- Balázs Csaba Németh
- Department of Medicine University of Szeged Szeged Hungary
- Imola Török
- County Emergency Clinical Hospital of Târgu Mures—Gastroenterology Clinic and University of Medicine, Pharmacy, Sciences and Technology ‘George Emil Palade’ Targu Mures Romania
- Hunor Farkas
- County Emergency Clinical Hospital of Târgu Mures—Gastroenterology Clinic and University of Medicine, Pharmacy, Sciences and Technology ‘George Emil Palade’ Targu Mures Romania
- Artautas Mickevicius
- Vilnius University Hospital Santaros Clinics Vilnius Lithuania
- Ville Sallinen
- Department of Transplantation and Liver Surgery Helsinki University Hospital and University of Helsinki Helsinki Finland
- Shamil Galeev
- Saint Luke Clinical Hospital St. Petersburg Russia
- Elena Ramírez‐Maldonado
- Department of General Surgery Consorci Sanitari del Garraf Sant Pere de Ribes Spain
- Andrea Párniczky
- Institute for Translational Medicine, Szentágothai Research Centre, Medical School University of Pécs Pécs Hungary
- Bálint Erőss
- Institute for Translational Medicine, Szentágothai Research Centre, Medical School University of Pécs Pécs Hungary
- Péter Jenő Hegyi
- Institute for Translational Medicine, Szentágothai Research Centre, Medical School University of Pécs Pécs Hungary
- Katalin Márta
- Division of Pancreatic Diseases, Heart and Vascular Centre Semmelweis University Budapest Hungary
- Szilárd Váncsa
- Institute for Translational Medicine, Szentágothai Research Centre, Medical School University of Pécs Pécs Hungary
- Robert Sutton
- Institute of Systems, Molecular and Integrative Biology University of Liverpool and Liverpool University Hospitals NHS Foundation Trust, Liverpool, England UK
- Peter Szatmary
- Institute of Systems, Molecular and Integrative Biology University of Liverpool and Liverpool University Hospitals NHS Foundation Trust, Liverpool, England UK
- Diane Latawiec
- Institute of Systems, Molecular and Integrative Biology University of Liverpool and Liverpool University Hospitals NHS Foundation Trust, Liverpool, England UK
- Chris Halloran
- Institute of Systems, Molecular and Integrative Biology University of Liverpool and Liverpool University Hospitals NHS Foundation Trust, Liverpool, England UK
- Enrique de‐Madaria
- Gastroenterology Department Alicante University General Hospital ISABIAL Alicante Spain
- Elizabeth Pando
- Department of Hepato‐Pancreato‐Biliary and Transplant Surgery Hospital Universitari Vall d'Hebron, Universitat Autònoma de Barcelona Barcelona Spain
- Piero Alberti
- Department of Hepato‐Pancreato‐Biliary and Transplant Surgery Hospital Universitari Vall d'Hebron, Universitat Autònoma de Barcelona Barcelona Spain
- Maria José Gómez‐Jurado
- Department of Hepato‐Pancreato‐Biliary and Transplant Surgery Hospital Universitari Vall d'Hebron, Universitat Autònoma de Barcelona Barcelona Spain
- Alina Tantau
- The 4th Medical Clinic Iuliu Hatieganu’ University of Medicine and Pharmacy Cluj‐Napoca Romania
- Andrea Szentesi
- Centre for Translational Medicine, Department of Medicine University of Szeged Szeged Hungary
- Péter Hegyi
- Institute for Translational Medicine, Szentágothai Research Centre, Medical School University of Pécs Pécs Hungary
- the Hungarian Pancreatic Study Group
- DOI
- https://doi.org/10.1002/ctm2.842
- Journal volume & issue
-
Vol. 12,
no. 6
pp. n/a – n/a
Abstract
Abstract Background Acute pancreatitis (AP) is a potentially severe or even fatal inflammation of the pancreas. Early identification of patients at high risk for developing a severe course of the disease is crucial for preventing organ failure and death. Most of the former predictive scores require many parameters or at least 24 h to predict the severity; therefore, the early therapeutic window is often missed. Methods The early achievable severity index (EASY) is a multicentre, multinational, prospective and observational study (ISRCTN10525246). The predictions were made using machine learning models. We used the scikit‐learn, xgboost and catboost Python packages for modelling. We evaluated our models using fourfold cross‐validation, and the receiver operating characteristic (ROC) curve, the area under the ROC curve (AUC), and accuracy metrics were calculated on the union of the test sets of the cross‐validation. The most critical factors and their contribution to the prediction were identified using a modern tool of explainable artificial intelligence called SHapley Additive exPlanations (SHAP). Results The prediction model was based on an international cohort of 1184 patients and a validation cohort of 3543 patients. The best performing model was an XGBoost classifier with an average AUC score of 0.81 ± 0.033 and an accuracy of 89.1%, and the model improved with experience. The six most influential features were the respiratory rate, body temperature, abdominal muscular reflex, gender, age and glucose level. Using the XGBoost machine learning algorithm for prediction, the SHAP values for the explanation and the bootstrapping method to estimate confidence, we developed a free and easy‐to‐use web application in the Streamlit Python‐based framework (http://easy‐app.org/). Conclusions The EASY prediction score is a practical tool for identifying patients at high risk for severe AP within hours of hospital admission. The web application is available for clinicians and contributes to the improvement of the model.
Keywords