Nature Communications (Feb 2022)

Whole-cell modeling in yeast predicts compartment-specific proteome constraints that drive metabolic strategies

  • Ibrahim E. Elsemman,
  • Angelica Rodriguez Prado,
  • Pranas Grigaitis,
  • Manuel Garcia Albornoz,
  • Victoria Harman,
  • Stephen W. Holman,
  • Johan van Heerden,
  • Frank J. Bruggeman,
  • Mark M. M. Bisschops,
  • Nikolaus Sonnenschein,
  • Simon Hubbard,
  • Rob Beynon,
  • Pascale Daran-Lapujade,
  • Jens Nielsen,
  • Bas Teusink

DOI
https://doi.org/10.1038/s41467-022-28467-6
Journal volume & issue
Vol. 13, no. 1
pp. 1 – 12

Abstract

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Metabolically active organelles compete for cytosolic space and resources during metabolism rewiring. Here, the authors develop a computational model of yeast metabolism and resource allocation to predict condition- and compartment-specific proteome constraints that govern metabolic strategies.