International Journal of Molecular Sciences (Apr 2024)

Halogen Bond-Assisted Supramolecular Dimerization of Pyridinium-Fused 1,2,4-Selenadiazoles via Four-Center Se<sub>2</sub>N<sub>2</sub> Chalcogen Bonding

  • Evgeny A. Dukhnovsky,
  • Alexander S. Novikov,
  • Alexey S. Kubasov,
  • Alexander V. Borisov,
  • Nkumbu Donovan Sikaona,
  • Anatoly A. Kirichuk,
  • Victor N. Khrustalev,
  • Andreii S. Kritchenkov,
  • Alexander G. Tskhovrebov

DOI
https://doi.org/10.3390/ijms25073972
Journal volume & issue
Vol. 25, no. 7
p. 3972

Abstract

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The synthesis and structural characterization of α-haloalkyl-substituted pyridinium-fused 1,2,4-selenadiazoles with various counterions is reported herein, demonstrating a strategy for directed supramolecular dimerization in the solid state. The compounds were obtained through a recently discovered 1,3-dipolar cycloaddition reaction between nitriles and bifunctional 2-pyridylselenyl reagents, and their structures were confirmed by the X-ray crystallography. α-Haloalkyl-substituted pyridinium-fused 1,2,4-selenadiazoles exclusively formed supramolecular dimers via four-center Se···N chalcogen bonding, supported by additional halogen bonding involving α-haloalkyl substituents. The introduction of halogens at the α-position of the substituent R in the selenadiazole core proved effective in promoting supramolecular dimerization, which was unaffected by variation of counterions. Additionally, the impact of cocrystallization with a classical halogen bond donor C6F3I3 on the supramolecular assembly was investigated. Non-covalent interactions were studied using density functional theory calculations and topological analysis of the electron density distribution, which indicated that all ChB, XB and HB interactions are purely non-covalent and attractive in nature. This study underscores the potential of halogen and chalcogen bonding in directing the self-assembly of functional supramolecular materials employing 1,2,4-selenadiazoles derived from recently discovered cycloaddition between nitriles and bifunctional 2-pyridylselenyl reagents.

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