Research Ideas and Outcomes (Nov 2016)
DNAqua-Net: Developing new genetic tools for bioassessment and monitoring of aquatic ecosystems in Europe
- Florian Leese,
- Florian Altermatt,
- Agnès Bouchez,
- Torbjørn Ekrem,
- Daniel Hering,
- Kristian Meissner,
- Patricia Mergen,
- Jan Pawlowski,
- Jeremy Piggott,
- Frédéric Rimet,
- Dirk Steinke,
- Pierre Taberlet,
- Alexander Weigand,
- Kessy Abarenkov,
- Pedro Beja,
- Lieven Bervoets,
- Snaedís Björnsdóttir,
- Pieter Boets,
- Angela Boggero,
- Atle Bones,
- Ángel Borja,
- Kat Bruce,
- Vojislava Bursić,
- Jens Carlsson,
- Fedor Čiampor,
- Zuzana Čiamporová-Zatovičová,
- Eric Coissac,
- Filipe Costa,
- Marieta Costache,
- Simon Creer,
- Zoltán Csabai,
- Kristy Deiner,
- Ángel DelValls,
- Stina Drakare,
- Sofia Duarte,
- Tina Eleršek,
- Stefano Fazi,
- Cene Fišer,
- Jean-François Flot,
- Vera Fonseca,
- Diego Fontaneto,
- Michael Grabowski,
- Wolfram Graf,
- Jóhannes Guðbrandsson,
- Micaela Hellström,
- Yaron Hershkovitz,
- Peter Hollingsworth,
- Bella Japoshvili,
- John Jones,
- Maria Kahlert,
- Belma Kalamujic Stroil,
- Panagiotis Kasapidis,
- Martyn Kelly,
- Mary Kelly-Quinn,
- Emre Keskin,
- Urmas Kõljalg,
- Zrinka Ljubešić,
- Irena Maček,
- Elvira Mächler,
- Andrew Mahon,
- Marketa Marečková,
- Maja Mejdandzic,
- Georgina Mircheva,
- Matteo Montagna,
- Christian Moritz,
- Vallo Mulk,
- Andreja Naumoski,
- Ion Navodaru,
- Judit Padisák,
- Snæbjörn Pálsson,
- Kristel Panksep,
- Lyubomir Penev,
- Adam Petrusek,
- Martin Pfannkuchen,
- Craig Primmer,
- Baruch Rinkevich,
- Ana Rotter,
- Astrid Schmidt-Kloiber,
- Pedro Segurado,
- Arjen Speksnijder,
- Pavel Stoev,
- Malin Strand,
- Sigitas Šulčius,
- Per Sundberg,
- Michael Traugott,
- Costas Tsigenopoulos,
- Xavier Turon,
- Alice Valentini,
- Berry van der Hoorn,
- Gábor Várbíró,
- Marlen Vasquez Hadjilyra,
- Javier Viguri,
- Irma Vitonytė,
- Alfried Vogler,
- Trude Vrålstad,
- Wolfgang Wägele,
- Roman Wenne,
- Anne Winding,
- Guy Woodward,
- Bojana Zegura,
- Jonas Zimmermann
Affiliations
- Florian Leese
- University of Duisburg-Essen
- Florian Altermatt
- Eawag
- Agnès Bouchez
- INFRA
- Torbjørn Ekrem
- NTNU University Museum
- Daniel Hering
- University of Duisburg-Essen
- Kristian Meissner
- Finnish Environment Institute
- Patricia Mergen
- Royal Museum for Central Africa
- Jan Pawlowski
- University of Geneva
- Jeremy Piggott
- University of Otago
- Frédéric Rimet
- INRA
- Dirk Steinke
- University of Guelph
- Pierre Taberlet
- Université Joseph Fourier
- Alexander Weigand
- University of Duisburg-Essen
- Kessy Abarenkov
- University of Tartu
- Pedro Beja
- CIBIO - Centro de Investigacao em Biodiversidade e Recursos Geneticos
- Lieven Bervoets
- University of Antwerp
- Snaedís Björnsdóttir
- University of Iceland
- Pieter Boets
- Provincial Centre of Environmental Research
- Angela Boggero
- National Research Council - Institute of Ecosystem Study
- Atle Bones
- Norwegian University of Science and Technology
- Ángel Borja
- AZTI
- Kat Bruce
- Nature Metrics Ltd
- Vojislava Bursić
- University of Novi Sad
- Jens Carlsson
- University College Dublin
- Fedor Čiampor
- Slovak Academy of Sciences
- Zuzana Čiamporová-Zatovičová
- Slovak Academy of Sciences
- Eric Coissac
- Universite Grenoble Alpes LECA
- Filipe Costa
- University of Minho
- Marieta Costache
- University to Bucharest
- Simon Creer
- Bangor University
- Zoltán Csabai
- University of Pecs
- Kristy Deiner
- University of Notre Dame
- Ángel DelValls
- University of Cadiz
- Stina Drakare
- Swedish University of Agricultural Sciences
- Sofia Duarte
- University of Minho
- Tina Eleršek
- National Institute of Biology
- Stefano Fazi
- Water Research Institute - National Research Council
- Cene Fišer
- University of Ljubljana
- Jean-François Flot
- Université libre de Bruxelles (ULB)
- Vera Fonseca
- Zoologisches Forschungsmuseum Alexander Koenig (ZFMK)
- Diego Fontaneto
- National Research Council - Institute of Ecosystem Study
- Michael Grabowski
- University of Lodz
- Wolfram Graf
- University of Natural Resources and Life Sciences
- Jóhannes Guðbrandsson
- Marine and Freshwater Research Institute
- Micaela Hellström
- AquaBiota Water Research
- Yaron Hershkovitz
- Tel Aviv University
- Peter Hollingsworth
- Royal Botanic Garden Edinburgh
- Bella Japoshvili
- Ilia State University
- John Jones
- River Communities Group, The River Laboratory
- Maria Kahlert
- Swedish University of Agricultural Sciences
- Belma Kalamujic Stroil
- University of Sarajevo
- Panagiotis Kasapidis
- Hellenic Centre of Marine Research
- Martyn Kelly
- Bowburn Consultancy
- Mary Kelly-Quinn
- University College Dublin
- Emre Keskin
- Ankara University
- Urmas Kõljalg
- University of Tartu
- Zrinka Ljubešić
- University of Zagreb
- Irena Maček
- University of Ljubljana
- Elvira Mächler
- Eawag
- Andrew Mahon
- Central Michigan University
- Marketa Marečková
- Crop Research Institute
- Maja Mejdandzic
- University of Zagreb
- Georgina Mircheva
- Ss. Cyril and Methodius University in Skopje
- Matteo Montagna
- Universita degli Studi di Milano
- Christian Moritz
- ARGE Limnologie GesmbH
- Vallo Mulk
- Estonian Research Council
- Andreja Naumoski
- Ss. Cyril and Methodius University in Skopje
- Ion Navodaru
- Institutul National de Cercetare-Dezvoltare Delta Dunarii
- Judit Padisák
- Institute of Environmental Science
- Snæbjörn Pálsson
- University of Iceland
- Kristel Panksep
- Estonian University of Life Sciences
- Lyubomir Penev
- Pensoft Publishers Ltd
- Adam Petrusek
- Charles University
- Martin Pfannkuchen
- Ruder Broskovic Institute
- Craig Primmer
- University of Turku
- Baruch Rinkevich
- National Institute of Oceanography
- Ana Rotter
- National Institute of Biology, Marine Biology Station
- Astrid Schmidt-Kloiber
- University of Natural Resources and Life Sciences
- Pedro Segurado
- Universidade de Lisboa
- Arjen Speksnijder
- Naturalis Biodiversity Center
- Pavel Stoev
- National Museum of Natural History
- Malin Strand
- Swedish Species Information Centre
- Sigitas Šulčius
- Nature Research Centre
- Per Sundberg
- University of Gothenburg
- Michael Traugott
- University of Innsbruck
- Costas Tsigenopoulos
- Hellenic Centre of Marine Research
- Xavier Turon
- Center for Advanced Studies of Blanes (CEAB-CSIC)
- Alice Valentini
- Spygen
- Berry van der Hoorn
- Naturalis Biodiversity Center
- Gábor Várbíró
- MTA Centre for Ecological Research, Danube Research Institute
- Marlen Vasquez Hadjilyra
- Cyprus University of Technology
- Javier Viguri
- University of Cantabria
- Irma Vitonytė
- Nature Research Centre
- Alfried Vogler
- Imperial College London
- Trude Vrålstad
- Norwegian Veterinary Institute
- Wolfgang Wägele
- Zoologisches Forschungsmuseum Alexander Koenig (ZFMK)
- Roman Wenne
- Polish Academy of Sciences
- Anne Winding
- Aarhus University
- Guy Woodward
- Imperial College London
- Bojana Zegura
- National Institute of Biology
- Jonas Zimmermann
- Botanic Garden and Botanical Museum
- DOI
- https://doi.org/10.3897/rio.2.e11321
- Journal volume & issue
-
Vol. 2
pp. 1 – 24
Abstract
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The protection, preservation and restoration of aquatic ecosystems and their functions are of global importance. For European states it became legally binding mainly through the EU-Water Framework Directive (WFD). In order to assess the ecological status of a given water body, aquatic biodiversity data are obtained and compared to a reference water body. The quantified mismatch obtained determines the extent of potential management actions. The current approach to biodiversity assessment is based on morpho-taxonomy. This approach has many drawbacks such as being time consuming, limited in temporal and spatial resolution, and error-prone due to the varying individual taxonomic expertise of the analysts. Novel genomic tools can overcome many of the aforementioned problems and could complement or even replace traditional bioassessment. Yet, a plethora of approaches are independently developed in different institutions, thereby hampering any concerted routine application. The goal of this Action is to nucleate a group of researchers across disciplines with the task to identify gold-standard genomic tools and novel eco-genomic indices for routine application in biodiversity assessments of European fresh- and marine water bodies. Furthermore, DNAqua-Net will provide a platform for training of the next generation of European researchers preparing them for the new technologies. Jointly with water managers, politicians, and other stakeholders, the group will develop a conceptual framework for the standard application of eco-genomic tools as part of legally binding assessments.