Nature Communications (May 2019)

Complete deconvolution of cellular mixtures based on linearity of transcriptional signatures

  • Konstantin Zaitsev,
  • Monika Bambouskova,
  • Amanda Swain,
  • Maxim N. Artyomov

DOI
https://doi.org/10.1038/s41467-019-09990-5
Journal volume & issue
Vol. 10, no. 1
pp. 1 – 16

Abstract

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Complete gene expression deconvolution remains a challenging problem. Here, the authors provide a solution based on the recognition that expression levels of cell type specific genes are mutually linear across mixtures and mutually linear gene clusters correspond to cell type-specific signatures.