Scientific Data (Oct 2024)

ProstateZones – Segmentations of the prostatic zones and urethra for the PROSTATEx dataset

  • William Holmlund,
  • Attila Simkó,
  • Karin Söderkvist,
  • Péter Palásti,
  • Szilvia Tótin,
  • Kamilla Kalmár,
  • Zsófia Domoki,
  • Zsuzsanna Fejes,
  • Zsigmond Tamás Kincses,
  • Patrik Brynolfsson,
  • Tufve Nyholm

DOI
https://doi.org/10.1038/s41597-024-03945-2
Journal volume & issue
Vol. 11, no. 1
pp. 1 – 5

Abstract

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Abstract Manual segmentations are considered the gold standard for ground truth in machine learning applications. Such tasks are tedious and time-consuming, albeit necessary to train reliable models. In this work, we present a dataset with expert segmentations of the prostatic zones and urethra for 200 randomly selected patients from the PROSTATEx dataset. Notably, independent duplicate segmentations were performed for 40 patients, providing inter-reader variability data. This results in a total of 240 segmentations. This dataset can be used to train machine learning models or serve as an external test set for evaluating models trained on private data, thereby addressing a current gap in the field. The delineated structures and terminology adhere to the latest Prostate Imaging Reporting and Data Systems v2.1 guidelines, ensuring consistency.