Frontiers in Marine Science (Mar 2024)

Advancing ecological assessment of the Arabian Gulf through eDNA metabarcoding: opportunities, prospects, and challenges

  • Thadickal V. Joydas,
  • Seerangan Manokaran,
  • Jayanath Gopi,
  • Jayachandran P. Rajakumar,
  • Lin Yu-Jia,
  • Moritz Heinle,
  • Mazen K. Nazal,
  • Karuppasamy P. Manikandan,
  • Maryam Qashqari,
  • Sowmya P. Mohandas,
  • Syed A. Hussain,
  • Rommel H. Maneja,
  • Ali M. Qasem,
  • Diego Lozano-Cortés,
  • Nabil S. Abuzaid

DOI
https://doi.org/10.3389/fmars.2024.1276956
Journal volume & issue
Vol. 11

Abstract

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The Arabian Gulf (hereafter ‘the Gulf’) is renowned for its unique ecological characteristics and distinct marine life. It offers a diverse range of ecosystems that have adapted to the impacts posed by natural stress and human activities. Regular biomonitoring and diversity assessments are necessary to document the health of the Gulf ecosystem and to implement appropriate measures for effective conservation and management. Recently, environmental DNA (eDNA), a total pool of DNA isolated from environmental samples, has emerged as a highly effective tool for ecological studies. This review explores the opportunities, prospects, and challenges associated with employing eDNA metabarcoding in the ecological assessment and biomonitoring of the Gulf. It provides an overview of the status of the Gulf ecosystem and discusses the potential applications of eDNA metabarcoding in assessing biodiversity, monitoring invasive species, and evaluating ecosystem health. Additionally, the investigation addresses the challenges inherent in implementing this technique, considering environmental complexities, methodological intricacies, and data interpretation. Overall, this review emphasizes the immense potential of eDNA metabarcoding in advancing ecological assessment in the Gulf and calls for further research and collaboration to harness its benefits in this unique marine ecosystem.

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