Nature Communications (Mar 2018)

BEARscc determines robustness of single-cell clusters using simulated technical replicates

  • D. T. Severson,
  • R. P. Owen,
  • M. J. White,
  • X. Lu,
  • B. Schuster-Böckler

DOI
https://doi.org/10.1038/s41467-018-03608-y
Journal volume & issue
Vol. 9, no. 1
pp. 1 – 7

Abstract

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Single cell messenger RNAseq allows the study of heterogeneity in tissue samples. Here the authors present BEARscc, a tool that uses RNA spike-in controls to simulate experiment-specific technical replicates to estimate the robustness of computational predictions of subpopulations of cells.