iScience (Dec 2023)

A multi-organ maize metabolic model connects temperature stress with energy production and reducing power generation

  • Niaz Bahar Chowdhury,
  • Margaret Simons-Senftle,
  • Berengere Decouard,
  • Isabelle Quillere,
  • Martine Rigault,
  • Karuna Anna Sajeevan,
  • Bibek Acharya,
  • Ratul Chowdhury,
  • Bertrand Hirel,
  • Alia Dellagi,
  • Costas Maranas,
  • Rajib Saha

Journal volume & issue
Vol. 26, no. 12
p. 108400

Abstract

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Summary: Climate change has adversely affected maize productivity. Thereby, a holistic understanding of metabolic crosstalk among its organs is important to address this issue. Thus, we reconstructed the first multi-organ maize metabolic model, iZMA6517, and contextualized it with heat and cold stress transcriptomics data using expression distributed reaction flux measurement (EXTREAM) algorithm. Furthermore, implementing metabolic bottleneck analysis on contextualized models revealed differences between these stresses. While both stresses had reducing power bottlenecks, heat stress had additional energy generation bottlenecks. We also performed thermodynamic driving force analysis, revealing thermodynamics-reducing power-energy generation axis dictating the nature of temperature stress responses. Thus, a temperature-tolerant maize ideotype can be engineered by leveraging the proposed thermodynamics-reducing power-energy generation axis. We experimentally inoculated maize root with a beneficial mycorrhizal fungus, Rhizophagus irregularis, and as a proof-of-concept demonstrated its efficacy in alleviating temperature stress. Overall, this study will guide the engineering effort of temperature stress-tolerant maize ideotypes.

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