Nature Communications (Jul 2016)

A combined cryo-EM and molecular dynamics approach reveals the mechanism of ErmBL-mediated translation arrest

  • Stefan Arenz,
  • Lars V. Bock,
  • Michael Graf,
  • C. Axel Innis,
  • Roland Beckmann,
  • Helmut Grubmüller,
  • Andrea C. Vaiana,
  • Daniel N. Wilson

DOI
https://doi.org/10.1038/ncomms12026
Journal volume & issue
Vol. 7, no. 1
pp. 1 – 14

Abstract

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When the antibiotic erythromycin is bound to the ribosomal exit tunnel, ErmBL peptide translation stalls and allows translation of the downstream methyltransferase ErmB. Here the authors combine cryo-EM and molecular dynamics simulations to identify the underlying basis for the inhibition of peptide bond formation that results in ribosome stalling.