iScience (Jun 2021)

Molecular docking-aided identification of small molecule inhibitors targeting β-catenin-TCF4 interaction

  • Joo-Leng Low,
  • Weina Du,
  • Tenzin Gocha,
  • Gokce Oguz,
  • Xiaoqian Zhang,
  • Ming Wei Chen,
  • Srdan Masirevic,
  • Daniel Guo Rong Yim,
  • Iain Bee Huat Tan,
  • Adaikalavan Ramasamy,
  • Hao Fan,
  • Ramanuj DasGupta

Journal volume & issue
Vol. 24, no. 6
p. 102544

Abstract

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Summary: Here we report a molecular docking-based approach to identify small molecules that can target the β-catenin (β-cat)-TCF4 protein-protein interaction (PPI), a key effector complex for nuclear Wnt signaling activity. Specifically, we developed and optimized a computational model of β-cat using publicly available β-cat protein crystal structures, and existing β-cat-TCF4 interaction inhibitors as the training set. Using our computational model to an in silico screen predicted 27 compounds as good binders to β-cat, of which 3 were identified to be effective against a Wnt-responsive luciferase reporter. In vitro functional validation experiments revealed GB1874 as an inhibitor of the Wnt pathway that targets the β-cat-TCF4 PPI. GB1874 also affected the proliferation and stemness of Wnt-addicted colorectal cancer (CRC) cells in vitro. Encouragingly, GB1874 inhibited the growth of CRC tumor xenografts in vivo, thus demonstrating its potential for further development into therapeutics against Wnt-associated cancer indications.

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