Journal of Nucleic Acids (Jan 2010)

Replication Past the š›¾-Radiation-Induced Guanine-Thymine Cross-Link G[8,5-Me]T by Human and Yeast DNA Polymerase šœ‚

  • Paromita Raychaudhury,
  • Ashis K. Basu

DOI
https://doi.org/10.4061/2010/101495
Journal volume & issue
Vol. 2010

Abstract

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š›¾-Radiation-induced intrastrand guanine-thymine cross-link, G[8,5-Me]T, hinders replication in vitro and is mutagenic in mammalian cells. Herein we report in vitro translesion synthesis of G[8,5-Me]T by human and yeast DNA polymerase šœ‚ (hPol šœ‚ and yPol šœ‚). dAMP misincorporation opposite the cross-linked G by yPol šœ‚ was preferred over correct incorporation of dCMP, but further extension was 100-fold less efficient for Gāˆ—:A compared to Gāˆ—:C. For hPol šœ‚, both incorporation and extension were more efficient with the correct nucleotides. To evaluate translesion synthesis in the presence of all four dNTPs, we have developed a plasmid-based DNA sequencing assay, which showed that yPol šœ‚ was more error-prone. Mutational frequencies of yPol šœ‚ and hPol šœ‚ were 36% and 14%, respectively. Targeted Gā†’T was the dominant mutation by both DNA polymerases. But yPol šœ‚ induced targeted Gā†’T in 23% frequency relative to 4% by hPol šœ‚. For yPol šœ‚, targeted Gā†’T and Gā†’C constituted 83% of the mutations. By contrast, with hPol šœ‚, semi-targeted mutations (7.2%), that is, mutations at bases near the lesion, occurred at equal frequency as the targeted mutations (6.9%). The kind of mutations detected with hPol šœ‚ showed significant similarities with the mutational spectrum of G[8,5-Me]T in human embryonic kidney cells.